Browse of TCMCG016C20208 protein

CDS

Accession Number	TCMCG016C20208
gbkey	CDS
Protein Id	OMO65741.1
Location	complement(join(139353..139541,139761..140498,140904..141044,141428..141679,143018..143070,143302..143506,144409..145155,145562..145702,146427..146654,147235..147348))
Organism	Corchorus capsularis
locus_tag	CCACVL1_21421

Protein

Length	935aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source	AWWV01012601.1
Definition	hypothetical protein CCACVL1_21421 [Corchorus capsularis]
Locus_tag	CCACVL1_21421

EGGNOG-MAPPER Annotation

COG_category	S
Description	DDB1- and CUL4-associated factor
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko04121        [VIEW IN KEGG]
KEGG_ko	ko:K11804        [VIEW IN KEGG]
EC	-
KEGG_Pathway	-
GOs	GO:0000151        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005654        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005739        [VIEW IN EMBL-EBI] GO:0005829        [VIEW IN EMBL-EBI] GO:0031461        [VIEW IN EMBL-EBI] GO:0031974        [VIEW IN EMBL-EBI] GO:0031981        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043233        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0070013        [VIEW IN EMBL-EBI] GO:0080008        [VIEW IN EMBL-EBI] GO:1902494        [VIEW IN EMBL-EBI] GO:1990234        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGACGAATAGAAGGGCGCGAACGAGCGTGGACAAGGCGGTGGTTGATGTTTGGCAACGGGAAGTCGGAGAACTCTCAACTAGGAATTTCGCTCACCGCCTAGCTGCTTCTGAGGATCTTGTACTCCGACTTGAACTTGACAAGAAACTTGAAAAGCACAGAGGTTGTGTGAATACAGTGAACTTTAATGCTGATGGTGATATTTTAGTCTCTGGCTCTGATGACAGACGAGTTATACTCTGGGATTGGGAGACTGGGCATGCAAAGCTCTCTTTTCAGTCAGGCCATGTCAGCAATGTTTTTCAAGCAAAATTCATGCCTTACACAGATGATCGCAGCTTGGTTCGACATGCTCAAATTTCGGAACGTGGGGTTGAAACTAAGCTGCTAGCCAAACATCAGGGACGAGCTCATAAATTGGCCATTGAACCTGGAAGCCCTCATATATTATATACTTGTGGTGAAGATGGATTAGTGCAGCATATTGATCTTAGAACTGGAACTGCCACAGAACTTTTCACATGCCATCCAATTAATGATAGCAGGAGGTATCCCCTTGAAGTGATCGGTCTCAATGCTATTGTAATTGATCCAAGGAATCCAAACCTCTTTGCGATTGCAGGATCAGATGAGTACACTCGCCTTTATGATATTCGCAAATATAAGTGGGATGCCTCTACAGATTTTGGCCAACCTACGGATCACTTTTGCCCACCTCATTTGAGTGATGAGCATGTTGGAATAACAGGCTTGGCTTTTTCAGATCAGAGTGAGCTTCTTGTCTCCTACGGTGGGGAATTCATCTATCTCTTCACGCGAGATATGGGACTGGGGCCCAATCCAGTCCCATCTTCTCCATTGTCTGCATGCAGTGAAGCAAGTGAAATGGGACTTGATCACTCAGCTGCATCAGCATCAGCTAAGGAAGCGATGGAAGCTATTCCCCAAGTTTACAAAGGACACAGAAATTGTGAGACAGTGAAAGGTGTCAGCTTTTTTGGACCTAAATCTGAGTATGTGGCTAGTGGATCTGACTGTGGCCGAATATTTATTTGGAAGAAGAAAGGTGGAGAGCTTGTTCGTGTTATGGAAGCAGATAAGCGTACTGTCAACTGTATTGAGTCTCATCCTCATACCATGGTTCTTGCTAGCAGCGGAATCGAAAACGACATCAAGATATGGACTCCAAAGGCCATTGATAAAGCTATTCTTCCAACAAACATTGAACAGTTCAAACCAAATTCTAGGGGCTGGATGTTGCCTGTAATTAGACCGCAGGACCTGATGTTGCGCTTATTTTCAATGCAAAGGCGGGGGGGTAGCCCGGAGCGGAATGGAGAAAACTCATCAGCAGCAAGCCGAGAACTTCTAGAGCTTATATGGACTTTCAACGCCAATAGTGATGCTTCTTCAGATGATGGAGGGGATCTCTCTGGTAAAATGAGATTTAGAGGAGGGGAGGACTGGACTGCATCCTTCACCGCGTTTGATTTTGTACTCCGACTTGAACTTGACAAGAAACTTGAAAAGCACAGAGGCTGTGTGAATACACTGAGCTTTAATGCTGATGGTGATATTTTAGTCTCTGGCTCTGATGACAGACAAGTTATACTATGGGATTGGGAGACTGGGCATGCAAAGCTCTCTTTTCAGTCAGGCCATGTCAACAATGTTTTCCAAGCAAAATTCATGCCTTACACTGATGATCGCAGCTTGGTCACCTGTGCTTTAGATGGGCAGGTTCGCCATGCTCAAATTTCGGAACGTGGGGTTGAAACTAAGCTGCTAGCCAAACATCAGGGACGAGCTTATAAATTGGCCATTGAACCTGGAAGCCCTCATATATTATACACTTGTGGTGAAGATAGATTAGTGCAGCATATTGATCTTAGAACTGGAACTGCCACAAAACTTTTCACATGCCATCCAATTAATGATAGCAGGAGGCGTCTCCTGCATCTGATCGGTCTCAATGCTATTGCAATTGATCCAAGGAATCCAAATCTCTTTGCAATTGCAGGATTCGATGAGTACACTCGCCTTTATGATATTCGCAAATATAAGTGGGATGCCTCTACAGATTTTGGCCAACCTACAGATCACTTTTGCCCACCTCATTTGATTGATGAGTATGTTGGAATAACAGGCTTGGCTTTTTCAGATCAGAGTGAGCTTCTTGTCTCCTACGGTAAGGAATGCATCTATCTCTTCACGCAGGATATGGGACTGGGGCCCAATCCAGTCCCATCTTCTCTATTGTCTGCATGCAGTGAAGCAAGTGAAATGGGACTTGATCACTCAGCTGCAACAGCATCAGCTAAGGAAGCTATTCCCCAAGTTTACAAAGGACACAGAAATTTTTACACAGTGAAAGGTGTCAGCTTCGTTGGACCTAAATCTGTGTATGTGGCTAGTGGATCTGACTGTGGCCAAATATTTATTTGGGAGAAGAAAGATGGAGAGCTTGTTCGTGTTATGGAAGCAGATAAGCATGTGGTCAACTGTATTGAGTCTCATCCTCATACCATGGTTCTTGCTAGCAGCGGAATCGAGAGCAACATCAAGATATGGAGTCCAACGGCCATTGATAAAGCTATTCTTCCAACAAACATTGAACAGTTCGATCCAAAATCTAGGAGCAGGATGTTTCCAGTAAGTGGACCGCAGGACCTGATGTTGCGCTTATCTTCATTGCAAAGGCAGGGGAGTAGCCCGGACCGGAATGGAGAAAACTCATCAGCAGTCAATAGTGATGCTTCTTCAGATGATGGAGGGGATGCCTCTGGTCCAGAAGACTTTTTTAGTTGA

Protein:   MTNRRARTSVDKAVVDVWQREVGELSTRNFAHRLAASEDLVLRLELDKKLEKHRGCVNTVNFNADGDILVSGSDDRRVILWDWETGHAKLSFQSGHVSNVFQAKFMPYTDDRSLVRHAQISERGVETKLLAKHQGRAHKLAIEPGSPHILYTCGEDGLVQHIDLRTGTATELFTCHPINDSRRYPLEVIGLNAIVIDPRNPNLFAIAGSDEYTRLYDIRKYKWDASTDFGQPTDHFCPPHLSDEHVGITGLAFSDQSELLVSYGGEFIYLFTRDMGLGPNPVPSSPLSACSEASEMGLDHSAASASAKEAMEAIPQVYKGHRNCETVKGVSFFGPKSEYVASGSDCGRIFIWKKKGGELVRVMEADKRTVNCIESHPHTMVLASSGIENDIKIWTPKAIDKAILPTNIEQFKPNSRGWMLPVIRPQDLMLRLFSMQRRGGSPERNGENSSAASRELLELIWTFNANSDASSDDGGDLSGKMRFRGGEDWTASFTAFDFVLRLELDKKLEKHRGCVNTLSFNADGDILVSGSDDRQVILWDWETGHAKLSFQSGHVNNVFQAKFMPYTDDRSLVTCALDGQVRHAQISERGVETKLLAKHQGRAYKLAIEPGSPHILYTCGEDRLVQHIDLRTGTATKLFTCHPINDSRRRLLHLIGLNAIAIDPRNPNLFAIAGFDEYTRLYDIRKYKWDASTDFGQPTDHFCPPHLIDEYVGITGLAFSDQSELLVSYGKECIYLFTQDMGLGPNPVPSSLLSACSEASEMGLDHSAATASAKEAIPQVYKGHRNFYTVKGVSFVGPKSVYVASGSDCGQIFIWEKKDGELVRVMEADKHVVNCIESHPHTMVLASSGIESNIKIWSPTAIDKAILPTNIEQFDPKSRSRMFPVSGPQDLMLRLSSLQRQGSSPDRNGENSSAVNSDASSDDGGDASGPEDFFS